CTU San Diego was a CTU Domestic Unit in the city of San Diego, California.
During the Second Wave crisis, CTU San Diego sent digital imaging specialist Randy Murdoch to analyze a burned paper fragment found at Al-Fulani's mosque. ("Day 2: 7:00pm-8:00pm")
During Day 4, Howard Bern was sent to CTU San Diego after he was identified as one of the assailants in CTU's raid on the Chinese consulate. However, on his way there he was intercepted by Cheng Zhi and forced to give up Jack Bauer, who had led the mission. ("Day 4: 5:00am-6:00am")
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